Thomas Nagel, atheist and philosopher professor at New York University, finds signficant weaknesses in neo-Darwinian evolution and chemical evolution. He published his view in a new Oxford University Press book Mind & Cosmos: Why the Materialist Neo-Darwinian Conception of Nature is Almost Certainly False. Evolution News and Views provides a number of intriguing quotes from the book.
There are signficant philosophical and scientific problems with evolution. Dissent with the reigning scientific paradigm of origins isn't only religiously motivated.